# Cell Composition

This analysis provides insights into the cellular makeup of tissues or samples, helping to understand how cell populations vary across conditions, treatments, or disease states. A [`Standard Compute`](https://documentation.panomics.bio/documentation/compute-runtimes/codeless-compute) runtime is required.

To run cell compositional analysis in Panomics, select the observation that refers to the cell type and the observation that represents the condition of interest (e.g.: tissue, disease, treatment).

## Command Results

### **Bar plot of cell type abundance**

<div><figure><img src="https://3894776587-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FUZMYHWMJyvkxhr9s6Lm5%2Fuploads%2FxOW6oC1Aoo0rl95Or4mh%2FScreenshot%202024-10-24%20at%2015.19.01.png?alt=media&#x26;token=8199b698-7635-4184-a796-6703aa2abdeb" alt=""><figcaption><p>By condition</p></figcaption></figure> <figure><img src="https://3894776587-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FUZMYHWMJyvkxhr9s6Lm5%2Fuploads%2FglMSN9fNMqpem8W2rFyW%2FScreenshot%202024-10-24%20at%2015.19.13.png?alt=media&#x26;token=485e49fe-5a63-4875-b808-2c99e2425ded" alt=""><figcaption><p>By sample</p></figcaption></figure></div>

### **Box plot of cell type abundance**

<figure><img src="https://3894776587-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FUZMYHWMJyvkxhr9s6Lm5%2Fuploads%2FSUKIHNb7QrY8yZzdP4DR%2FScreenshot%202024-10-24%20at%2015.20.23.png?alt=media&#x26;token=af85c765-d148-49aa-899e-b3b438186702" alt="" width="563"><figcaption></figcaption></figure>

### **Effect bar plot and data**

<div><figure><img src="https://3894776587-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FUZMYHWMJyvkxhr9s6Lm5%2Fuploads%2F8x12KZWCp1VSayxBrtFy%2FScreenshot%202024-10-24%20at%2015.20.34.png?alt=media&#x26;token=e4695e63-e3bd-4b04-8978-7b62493b713e" alt=""><figcaption></figcaption></figure> <figure><img src="https://3894776587-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FUZMYHWMJyvkxhr9s6Lm5%2Fuploads%2FBGXvnaCPtpdiqpgID8xY%2FScreenshot%202024-10-24%20at%2015.21.04.png?alt=media&#x26;token=6e46364a-4160-4ebf-ace1-73ce66de483e" alt=""><figcaption></figcaption></figure></div>

## Video demonstration

{% embed url="<https://www.loom.com/share/5c73181353cb4785a8cbde9047b0b5db?sid=a003c507-1409-4f22-97fb-b66f55012aaa>" %}
