Panomics Documentation
  • Overview
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    • Project Structure
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    • Sample Lifecycle
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    • Create an Analysis
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    • Publish an Analysis
    • View Analysis Audit Trail
    • Analysis Workbench
      • Quality Control
      • Gene Expression
      • Compute Statistics
      • Sample/Cell Explorer
        • Normalization
        • UMAP
      • Cell Composition
      • Marker Genes
      • Differential Gene Expression
      • Differential Pathway Activity
      • WGCNA
      • Gene Set Enrichment
    • Data Slices
  • OmicsBrowser
  • Gene Signature Similarity
  • Compute Runtimes
    • Codeless Compute
    • Code-based Compute
  • API Keys
  • Administration
    • Roles
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    • Ontologies
    • Metadata Fields
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  • Spinning-up a Standard Compute runtime
  • Terminating a Standard Compute runtime
  1. Compute Runtimes

Codeless Compute

User friendly, point and click analyses.

PreviousCompute RuntimesNextCode-based Compute

Last updated 6 months ago

The Standard Compute runtime enables users to leverage point-and-click commands within an analysis' interactive workbench.

Spinning-up a Standard Compute runtime

Provisioning a Standard Compute runtime requires selecting an instance type and the maximum allowed idle time in hours (1 to 12). The maximum allowed idle time is reached if no commands are launched within the specified time interval. When this happens, Panomics automatically terminates your runtime.

Set the maximum idle time threshold to exceed the expected runtime of your bioinformatics commands. Examples of potentially long running commands are cell type prediction and WGCNA.

The Standard Compute runtime becomes available after approximately 10 minutes.

Terminating a Standard Compute runtime

To terminate a Standard Compute runtime, simply click the "Terminate" icon in the runtimes' dropdown menu. All running jobs will be canceled.

Spin-up a Standard Compute runtime
Terminate a Standard Compute runtime